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Kong, Xiangduo; Stephens, Jared; Ball, Alexander R.; Heale, Jason T.; Newkirk, Daniel A.; Berns, Michael W.; Yokomori, Kyoko

Condensin I Recruitment to Base Damage-Enriched DNA Lesions Is Modulated by PARP1

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Public Library of Science (PLoS), 2011

Published in: PLoS ONE
Sprague, Jared M.; Yekkirala, Ajay S.; Singh, Bhagat; Tochitsky, Ivan; Stephens, Michael; Viramontes, Octavio; Ivanis, Jelena; Biscola, Natalia P.; Havton, Leif A.; Woolf, Clifford J.; Latremoliere, Alban

Bortezomib-induced neuropathy is in part mediated by the sensitization of TRPV1 channels

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Springer Science and Business Media LLC, 2023

Published in: Communications Biology
Jared Lumpe; Lynette Gumbleton; Andrew Gorzalski; Kevin Libuit; Vici Varghese; Tyler Lloyd; Farid Tadros; Tyler Arsimendi; Eileen Wagner; Craig Stephens; Joel Sevinsky; David Hess; Mark Pandori

GAMBIT (Genomic Approximation Method for Bacterial Identification and Tracking): A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification

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2023

Published in: PLoS ONE
Lumpe, Jared; Gumbleton, Lynette; Gorzalski, Andrew; Libuit, Kevin; Varghese, Vici; Lloyd, Tyler; Tadros, Farid; Arsimendi, Tyler; Wagner, Eileen; Stephens, Craig; Sevinsky, Joel; Hess, David; Pandori, Mark

GAMBIT (Genomic Approximation Method for Bacterial Identification and Tracking): A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification

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Public Library of Science (PLoS), 2023

Published in: PLOS ONE
Wallace, Jared; Hu, Ruozhen; Mosbruger, Timothy L.; Dahlem, Timothy J.; Stephens, W. Zac; Rao, Dinesh S.; Round, June L.; O’Connell, Ryan M.

Genome-Wide CRISPR-Cas9 Screen Identifies MicroRNAs That Regulate Myeloid Leukemia Cell Growth

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Public Library of Science (PLoS), 2016

Published in: PLOS ONE
Sheikh, Aaesha I.; Caswell, Deborah; Dick, Cynthia; Gang, Spencer; Jarrell, Justin; Kohli, Ankita; Lieu, Amanda; Lumpe, Jared; Garrett, Meghan; Parker, Jennifer; Stephens, Craig

Regulation of D-galacturonate metabolism in <i>Caulobacter crescentus</i> by HumR, a LacI-family transcriptional repressor

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Scientific Research Publishing, Inc., 2013

Published in: Advances in Bioscience and Biotechnology
Kong, Xiangduo; Mohanty, Samarendra K.; Stephens, Jared; Heale, Jason T.; Gomez-Godinez, Veronica; Shi, Linda Z.; Kim, Jong-Soo; Yokomori, Kyoko; Berns, Michael W.

Comparative analysis of different laser systems to study cellular responses to DNA damage in mammalian cells

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Oxford University Press (OUP), 2009

Published in: Nucleic Acids Research
Glässel, P.; Simon, R. S.; Diamond, R. M.; Jared, R. C.; Lee, I. Y.; Moretto, L. G.; Newton, J. O.; Schmitt, R.; Stephens, F. S.

Angular-Momentum Transfer in Deep-Inelastic Processes

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American Physical Society (APS), 1977

Published in: Physical Review Letters
Daar, Eric; Orkin, Chloe; Sax, Paul; Stephens, Jeffrey L; Koenig, Ellen; Clarke, Amanda; Baumgarten, Axel; Brinson, Cynthia; Ramgopal, Moti; Huang, Hailin; Farrow, Terry; Baeten, Jared; Hindman, Jason; Martin, Hal; Workowski, Kimberly

69. Incidence of metabolic complications among treatment-naïve adults living with HIV-1 randomized to B/F/TAF, DTG/ABC/3TC or DTG+F/TAF after 144 Weeks

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Oxford University Press (OUP), 2021

Published in: Open Forum Infectious Diseases
Wallace, Jared; Kagele, Dominique; Hu, Ruozhen; Runtsch, Marah; Alexander, Margaret; Huffaker, Thomas; Mosbruger, Timothy; Dahlem, Timothy; Stephens, W. Zac; Rao, Dinesh S.; Miles, Rodney R.; Round, June; O'Connell, Ryan M.

Genome-Wide Crispr-Cas9 Screen Identifies Functionally Relevant Micro-RNAs in FLT3-ITD+ AML

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American Society of Hematology, 2015

Published in: Blood
Plummer, Ruth; Dua, Divyanshu; Cresti, Nicola; Suder, Aneta; Drew, Yvette; Prathapan, Vasanthi; Stephens, Peter; Thornton, Jared K; de las Heras, Begoña; Ink, Barbara; Lee, Lucy; Matijevic, Mark; McGrath, Shannon; Sarker, Debashis

Phase 1 study of the PARP inhibitor E7449 as a single agent in patients with advanced solid tumors or B-cell lymphoma

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American Society of Clinical Oncology (ASCO), 2014

Published in: Journal of Clinical Oncology
Stephens, Timothy W.; Chou, Vicky; Quay, Amanda N.; Shen, Connie; Dabadge, Nishu; Tian, Amy; Loera, Matthew; Willis, Bria; Wilson, Anastasia; Acree, William E.; Twu, Pamela; Anderson, Jared L.; Abraham, Michael H.

Thermochemical investigations of solute transfer into ionic liquid solvents: updated Abraham model equation coefficients for solute activity coefficient and partition coefficient predictions

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Informa UK Limited, 2014

Published in: Physics and Chemistry of Liquids
Pan, Yuanwang; Hao, Yuan; Han, Han; Chen, Ting; Ding, Hailin; Labbe, Kristen E; Shum, Elaine; Guidry, Kayla; Hu, Hai; Sherman, Fiona; Geng, Ke; Stephens, Janaye; Chafitz, Alison; Tang, Sittinon; Huang, Hsin-Yi; Peng, Chengwei; Almonte, Christina; Lopes, Jared E; Losey, Heather C; Winquist, Raymond J; Velcheti, Vamsidhar; Zhang, Hua; Wong, Kwok-Kin

Nemvaleukin alfa, a novel engineered IL-2 fusion protein, drives antitumor immunity and inhibits tumor growth in small cell lung cancer

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BMJ, 2022

Published in: Journal for ImmunoTherapy of Cancer
Zhou, Tongqing; Tsybovsky, Yaroslav; Gorman, Jason; Rapp, Micah; Cerutti, Gabriele; Chuang, Gwo-Yu; Katsamba, Phinikoula S.; Sampson, Jared M.; Schön, Arne; Bimela, Jude; Boyington, Jeffrey C.; Nazzari, Alexandra; Olia, Adam S.; Shi, Wei; Sastry, Mallika; Stephens, Tyler; Stuckey, Jonathan; Teng, I-Ting; Wang, Pengfei; Wang, Shuishu; Zhang, Baoshan; Friesner, Richard A.; Ho, David D.; Mascola, John; [...]

Cryo-EM Structures Delineate a pH-Dependent Switch that Mediates Endosomal Positioning of SARS-CoV-2 Spike Receptor-Binding Domains

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Elsevier BV, 2020

Published in: SSRN Electronic Journal
Zhou, Tongqing; Tsybovsky, Yaroslav; Gorman, Jason; Rapp, Micah; Cerutti, Gabriele; Chuang, Gwo-Yu; Katsamba, Phinikoula S.; Sampson, Jared M.; Schön, Arne; Bimela, Jude; Boyington, Jeffrey C.; Nazzari, Alexandra; Olia, Adam S.; Shi, Wei; Sastry, Mallika; Stephens, Tyler; Stuckey, Jonathan; Teng, I-Ting; Wang, Pengfei; Wang, Shuishu; Zhang, Baoshan; Friesner, Richard A.; Ho, David D.; Mascola, John R.; [...]

Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains

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Elsevier BV, 2020

Published in: Cell Host & Microbe
Di Francesco, James; Keown, Jared; Fallscheer, Cassandra; André, Philippe; Ladjelate, Bilal; Könyves, Vera; Men’shchikov, Alexander; Stephens-Whale, Shaun; Nguyen-Luong, Quang; Martin, Peter; Sadavoy, Sarah; Pezzuto, Stefano; Fiorellino, Eleonora; Benedettini, Milena; Schneider, Nicola; Bontemps, Sylvain; Arzoumanian, Doris; Palmeirim, Pedro; Kirk, Jason M.; Ward-Thompson, Derek

Herschel Gould Belt Survey Observations of Dense Cores in the Cepheus Flare Clouds

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American Astronomical Society, 2020

Published in: The Astrophysical Journal
Keown, Jared; Francesco, James Di; Rosolowsky, Erik; Singh, Ayushi; Figura, Charles; Kirk, Helen; Anderson, L. D.; Chen, Michael Chun-Yuan; Elia, Davide; Friesen, Rachel; Ginsburg, Adam; Marston, A.; Pezzuto, Stefano; Schisano, Eugenio; Bontemps, Sylvain; Caselli, Paola; Liu, Hong-Li; Longmore, Steven; Motte, Frédérique; Myers, Philip C.; Offner, Stella S. R.; Sanhueza, Patricio; Schneider, Nicola; Stephens, Ian;

KFPA Examinations of Young STellar Object Natal Environments (KEYSTONE): Hierarchical Ammonia Structures in Galactic Giant Molecular Clouds

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American Astronomical Society, 2019

Published in: The Astrophysical Journal
Uthoff, Johanna; Stephens, Matthew J.; Newell, John D.; Hoffman, Eric A.; Larson, Jared; Koehn, Nicholas; De Stefano, Frank A.; Lusk, Chrissy M.; Wenzlaff, Angela S.; Watza, Donovan; Neslund‐Dudas, Christine; Carr, Laurie L.; Lynch, David A.; Schwartz, Ann G.; Sieren, Jessica C.

Machine learning approach for distinguishing malignant and benign lung nodules utilizing standardized perinodular parenchymal features from CT

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Wiley, 2019

Published in: Medical Physics
Ross, Jeffrey S.; Ali, Siraj M.; Fasan, Omotayo; Block, Jared; Pal, Sumanta; Elvin, Julia A.; Schrock, Alexa B.; Suh, James; Nozad, Sahar; Kim, Sungeun; Jeong Lee, Hwa; Sheehan, Christine E.; Jones, David M.; Vergilio, Jo-Anne; Ramkissoon, Shakti; Severson, Eric; Daniel, Sugganth; Fabrizio, David; Frampton, Garrett; Miller, Vince A.; Stephens, Philip J.; Gay, Laurie M.

ALK Fusions in a Wide Variety of Tumor Types Respond to Anti-ALK Targeted Therapy

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Oxford University Press (OUP), 2017

Published in: The Oncologist
Chalmers, Zachary R.; Connelly, Caitlin F.; Fabrizio, David; Gay, Laurie; Ali, Siraj M.; Ennis, Riley; Schrock, Alexa; Campbell, Brittany; Shlien, Adam; Chmielecki, Juliann; Huang, Franklin; He, Yuting; Sun, James; Tabori, Uri; Kennedy, Mark; Lieber, Daniel S.; Roels, Steven; White, Jared; Otto, Geoffrey A.; Ross, Jeffrey S.; Garraway, Levi; Miller, Vincent A.; Stephens, Phillip J.; Frampton, Garrett M.

Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden

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Springer Science and Business Media LLC, 2017

Published in: Genome Medicine

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