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  1. El Nahhas, Omar S. M. [Author]; Loeffler, Chiara M. L. [Author]; Carrero, Zunamys I. [Author]; van Treeck, Marko [Author]; Kolbinger, Fiona R. [Author]; Hewitt, Katherine J. [Author]; Muti, Hannah S. [Author]; Graziani, Mara [Author]; Zeng, Qinghe [Author]; Calderaro, Julien [Author]; Ortiz-Brüchle, Nadina [Author]; Yuan, Tanwei [Author]; Hoffmeister, Michael [Author]; Brenner, Hermann [Author]; Brobeil, Alexander [Author]; Reis-Filho, Jorge S. [Author]; Kather, Jakob Nikolas [Author]

    Regression-based Deep-Learning predicts molecular biomarkers from pathology slides

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    10 February 2024

    Published in: Nature Communications ; 15(2024), 1, Artikel-ID 1253, Seite 1-13

  2. El Nahhas, Omar S. M.; Wölflein, Georg; Ligero, Marta; Lenz, Tim; van Treeck, Marko; Khader, Firas; Truhn, Daniel; Kather, Jakob Nikolas

    Lecture Notes in Computer Science: Joint Multi-task Learning Improves Weakly-Supervised Biomarker Prediction in Computational Pathology

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    Springer Nature Switzerland, 2024

    Published in: Lecture Notes in Computer Science (2024), Seite 254-262

  3. El Nahhas, Omar S. M.; van Treeck, Marko; Wölflein, Georg; Unger, Michaela; Ligero, Marta; Lenz, Tim; Wagner, Sophia J.; Hewitt, Katherine J.; Khader, Firas; Foersch, Sebastian; Truhn, Daniel; Kather, Jakob Nikolas

    From whole-slide image to biomarker prediction: end-to-end weakly supervised deep learning in computational pathology

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    Springer Science and Business Media LLC, 2024

    Published in: Nature Protocols (2024)

  4. El Nahhas, Omar S. M.; Loeffler, Chiara M. L.; Carrero, Zunamys I.; van Treeck, Marko; Kolbinger, Fiona R.; Hewitt, Katherine J.; Muti, Hannah S.; Graziani, Mara; Zeng, Qinghe; Calderaro, Julien; Ortiz-Brüchle, Nadina; Yuan, Tanwei; Hoffmeister, Michael; Brenner, Hermann; Brobeil, Alexander; Reis-Filho, Jorge S.; Kather, Jakob Nikolas

    Author Correction: Regression-based Deep-Learning predicts molecular biomarkers from pathology slides

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    Springer Science and Business Media LLC, 2024

    Published in: Nature Communications, 15 (2024) 1

  5. El Nahhas, Omar S. M.; Loeffler, Chiara M. L.; Carrero, Zunamys I.; van Treeck, Marko; Kolbinger, Fiona R.; Hewitt, Katherine J.; Muti, Hannah S.; Graziani, Mara; Zeng, Qinghe; Calderaro, Julien; Ortiz-Brüchle, Nadina; Yuan, Tanwei; Hoffmeister, Michael; Brenner, Hermann; Brobeil, Alexander; Reis-Filho, Jorge S.; Kather, Jakob Nikolas

    Regression-based Deep-Learning predicts molecular biomarkers from pathology slides

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    Springer Science and Business Media LLC, 2024

    Published in: Nature Communications, 15 (2024) 1

  6. Loeffler, Chiara Maria Lavinia; El Nahhas, Omar S. M.; Muti, Hannah Sophie; Carrero, Zunamys I.; Seibel, Tobias; van Treeck, Marko; Cifci, Didem; Gustav, Marco; Bretz, Kevin; Gaisa, Nadine T.; Lehmann, Kjong-Van; Leary, Alexandra; Selenica, Pier; Reis-Filho, Jorge S.; Ortiz-Bruechle, Nadina; Kather, Jakob Nikolas

    Prediction of homologous recombination deficiency from routine histology with attention-based multiple instance learning in nine different tumor types

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    Springer Science and Business Media LLC, 2024

    Published in: BMC Biology, 22 (2024) 1

  7. Ligero, Marta; Serna, Garazi; El Nahhas, Omar S.M.; Sansano, Irene; Mauchanski, Siarhei; Viaplana, Cristina; Calderaro, Julien; Toledo, Rodrigo A.; Dienstmann, Rodrigo; Vanguri, Rami S.; Sauter, Jennifer L.; Sanchez-Vega, Francisco; Shah, Sohrab P.; Ramón y Cajal, Santiago; Garralda, Elena; Nuciforo, Paolo; Perez-Lopez, Raquel; Kather, Jakob Nikolas

    Weakly Supervised Deep Learning Predicts Immunotherapy Response in Solid Tumors Based on PD-L1 Expression

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    American Association for Cancer Research (AACR), 2024

    Published in: Cancer Research Communications, 4 (2024) 1, Seite 92-102

  8. Hewitt, Katherine J; Löffler, Chiara M L; Muti, Hannah Sophie; Berghoff, Anna Sophie; Eisenlöffel, Christian; van Treeck, Marko; Carrero, Zunamys I; El Nahhas, Omar S M; Veldhuizen, Gregory P; Weil, Sophie; Saldanha, Oliver Lester; Bejan, Laura; Millner, Thomas O; Brandner, Sebastian; Brückmann, Sascha; Kather, Jakob Nikolas

    Direct image to subtype prediction for brain tumors using deep learning

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    Oxford University Press (OUP), 2023

    Published in: Neuro-Oncology Advances, 5 (2023) 1