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Schimak, Mario P.; Kleiner, Manuel; Wetzel, Silke; Liebeke, Manuel; Dubilier, Nicole; Fuchs, Bernhard M.

MiL-FISH: Multilabeled Oligonucleotides for Fluorescence In Situ Hybridization Improve Visualization of Bacterial Cells

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American Society for Microbiology, 2016

Published in: Applied and Environmental Microbiology, 82 (2016) 1, Seite 62-70
Sheriff, Emma K; Salvato, Fernanda; Andersen, Shelby E; Chatterjee, Anushila; Kleiner, Manuel; Duerkop, Breck A

Enterococcal quorum-controlled protease alters phage infection

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Oxford University Press (OUP), 2024

Published in: FEMS Microbes (2024)
Parnell, J. Jacob; Vintila, Simina; Tang, Clara; Wagner, Maggie R.; Kleiner, Manuel

Evaluation of ready-to-use freezer stocks of a synthetic microbial community for maize root colonization

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American Society for Microbiology, 2024

Published in: Microbiology Spectrum, 12 (2024) 1
Hornstein, Eli D.; Charles, Melodi; Franklin, Megan; Edwards, Brianne; Vintila, Simina; Kleiner, Manuel; Sederoff, Heike

IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss

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Springer Science and Business Media LLC, 2024

Published in: Plant Molecular Biology, 114 (2024) 2
Ratinskaia, Lina; Malavin, Stas; Zvi-Kedem, Tal; Vintila, Simina; Kleiner, Manuel; Rubin-Blum, Maxim

Metabolically-versatile Ca. Thiodiazotropha symbionts of the deep-sea lucinid clam Lucinoma kazani have the genetic potential to fix nitrogen

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Oxford University Press (OUP), 2024

Published in: ISME Communications, 4 (2024) 1
Maier, Jessie L.; Gin, Craig; Callahan, Benjamin; Sheriff, Emma K.; Duerkop, Breck A.; Kleiner, Manuel

Pseudo-pac site sequences used by phage P22 in generalized transduction of Salmonella

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Public Library of Science (PLoS), 2024

Published in: PLOS Pathogens, 20 (2024) 6, Seite e1012301
Zvi-Kedem, Tal; Vintila, Simina; Kleiner, Manuel; Tchernov, Dan; Rubin-Blum, Maxim

Metabolic handoffs between multiple symbionts may benefit the deep-sea bathymodioline mussels

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Oxford University Press (OUP), 2023

Published in: ISME Communications, 3 (2023) 1
Salvato, Fernanda; Vintila, Simina; Finkel, Omri M.; Dangl, Jeffery L.; Kleiner, Manuel

Evaluation of Protein Extraction Methods for Metaproteomic Analyses of Root-Associated Microbes

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Scientific Societies, 2022

Published in: Molecular Plant-Microbe Interactions®, 35 (2022) 11, Seite 977-988
Smith, Stephanie; Salvato, Fernanda; Garikipati, Aditi; Kleiner, Manuel; Septer, Alecia N.

Activation of the Type VI Secretion System in the Squid Symbiont Vibrio fischeri Requires the Transcriptional Regulator TasR and the Structural Proteins TssM and TssA

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American Society for Microbiology, 2021

Published in: Journal of Bacteriology, 203 (2021) 21
Sogin, E. Maggie; Kleiner, Manuel; Borowski, Christian; Gruber-Vodicka, Harald R.; Dubilier, Nicole

Life in the Dark: Phylogenetic and Physiological Diversity of Chemosynthetic Symbioses

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Annual Reviews, 2021

Published in: Annual Review of Microbiology, 75 (2021) 1, Seite 695-718
Ataeian, Maryam; Vadlamani, Agasteswar; Haines, Marianne; Mosier, Damon; Dong, Xiaoli; Kleiner, Manuel; Strous, Marc; Hawley, Alyse

Whole Genome Sequence and Experimental Proteome of Candidatus 'Phormidium Alkaliphilum', an Abundant and Widespread Cyanobacterium With Applications in Biotechnology

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Elsevier BV, 2021

Published in: SSRN Electronic Journal (2021)
Speare, Lauren; Smith, Stephanie; Salvato, Fernanda; Kleiner, Manuel; Septer, Alecia N.

Environmental Viscosity Modulates Interbacterial Killing during Habitat Transition

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American Society for Microbiology, 2020

Published in: mBio, 11 (2020) 1
Werneck-de-Castro, Joao Pedro; Blandino-Rosano, Manuel; Hilfiker-Kleiner, Denise; Bernal-Mizrachi, Ernesto

Glucose stimulates microRNA-199 expression in murine pancreatic β-cells

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Elsevier BV, 2020

Published in: Journal of Biological Chemistry, 295 (2020) 5, Seite 1261-1270
Werneck-de-Castro, Joao Pedro; Blandino-Rosano, Manuel; Hilfiker-Kleiner, Denise; Bernal-Mizrachi, Ernesto

Glucose stimulates microRNA-199 expression in murine pancreatic β-cells

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Elsevier BV, 2020

Published in: Journal of Biological Chemistry, 295 (2020) 5, Seite 1261-1270
Sato, Yui; Wippler, Juliane; Wentrup, Cecilia; Woyke, Tanja; Dubilier, Nicole; Kleiner, Manuel

High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis

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American Society for Microbiology, 2020

Published in: Microbiology Resource Announcements, 9 (2020) 31
Kleiner, Manuel; Bushnell, Brian; Sanderson, Kenneth E.; Hooper, Lora V.; Duerkop, Breck A.

Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities

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Springer Science and Business Media LLC, 2020

Published in: Microbiome, 8 (2020) 1
Hinzke, Tjorven; Kouris, Angela; Hughes, Rebecca-Ayme; Strous, Marc; Kleiner, Manuel

More Is Not Always Better: Evaluation of 1D and 2D-LC-MS/MS Methods for Metaproteomics

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Frontiers Media SA, 2019

Published in: Frontiers in Microbiology, 10 (2019)
Zorz, Jackie K.; Kozlowski, Jessica A.; Stein, Lisa Y.; Strous, Marc; Kleiner, Manuel

Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria

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Frontiers Media SA, 2018

Published in: Frontiers in Microbiology, 9 (2018)
Kleiner, Manuel; Dong, Xiaoli; Hinzke, Tjorven; Wippler, Juliane; Thorson, Erin; Mayer, Bernhard; Strous, Marc

Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities

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Proceedings of the National Academy of Sciences, 2018

Published in: Proceedings of the National Academy of Sciences, 115 (2018) 24
Kleiner, Manuel; Dong, Xiaoli; Hinzke, Tjorven; Wippler, Juliane; Thorson, Erin; Mayer, Bernhard; Strous, Marc

Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities

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National Academy of Sciences, 2018

Published in: Proceedings of the National Academy of Sciences of the United States of America, 115 (2018) 24, Seite E5576-E5584

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