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Jemaa, Skander; Tracy, Samuel; Bottos, Alessia; de Crespigny, Alex; Bengtsson, Thomas; Nielsen, Tina G; Paulson, Joseph N

Automated Baseline Fluorodeoxyglucose-Positron Emission Tomography Imaging and High BCL2 Expression Provide Orthogonal Prognostic Value in Predicting High-Risk De Novo Diffuse Large B-Cell Lymphoma Patients

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American Society of Hematology, 2020

Published in: Blood
Yan, Mark; Chang, Yi Meng; Raghavan, Vibha; Dong, Estella; Klein, Christian; Nielsen, Tina G; Paulson, Joseph N; Hatzi, Katerina

Lymphoma Microenvironment Deconvolution Links M1 Macrophage Infiltration to Clinical Outcome in Diffuse Large B-Cell Lymphoma

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American Society of Hematology, 2020

Published in: Blood
Li, Xiao; Jemaa, Skander; Carano, Richard AD; Bengtsson, Thomas; Paulson, Joseph N; Jansen, Gunther; Nielsen, Tina G; Hibar, Derrek P

A Prognostic Model Incorporating Tumor Lesion Morphology and Texture Features Identifies High-Risk Patient Subpopulations in De Novo DLBCL and FL

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American Society of Hematology, 2020

Published in: Blood
Bataillard, Edward; Harris, Will; El-Galaly, Tarec Christoffer; Kwan, Antonia; Henneges, Carsten; Paulson, Joseph N; Nielsen, Tina G

TRAIL (Tolerability of R-CHOP in Aggressive non-Hodgkin Lymphoma): A Predictive Algorithm to Support Clinical Decision-Making

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American Society of Hematology, 2020

Published in: Blood
Wagner, Justin; Chelaru, Florin; Kancherla, Jayaram; Paulson, Joseph N; Zhang, Alexander; Felix, Victor; Mahurkar, Anup; Elmqvist, Niklas; Corrada Bravo, Héctor

Metaviz: interactive statistical and visual analysis of metagenomic data

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Oxford University Press (OUP), 2018

Published in: Nucleic Acids Research
Erhardt, Joseph A.; Hynicka, Weslia; DiBenedetto, Angela; Shen, Ning; Stone, Nicole; Paulson, Henry; Pittman, Randall N.

A Novel F Box Protein, NFB42, Is Highly Enriched in Neurons and Induces Growth Arrest

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Elsevier BV, 1998

Published in: Journal of Biological Chemistry
Kumar, M. Senthil; Slud, Eric V.; Hehnly, Christine; Zhang, Lijun; Broach, James; Irizarry, Rafael A.; Schiff, Steven J.; Paulson, Joseph N.

Differential richness inference for 16S rRNA marker gene surveys

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Springer Science and Business Media LLC, 2022

Published in: Genome Biology
Movassagh, Mercedeh; Morton, Sarah U.; Hehnly, Christine; Smith, Jasmine; Doan, Trang T.; Irizarry, Rafael; Broach, James R.; Schiff, Steven J.; Bailey, Jeffrey A.; Paulson, Joseph N.

mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis

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Springer Science and Business Media LLC, 2022

Published in: BMC Genomics
Kim, Eugene; Jiang, Yanwen; Xu, Tao; Bazeos, Alexandra; Knapp, Andrea; Bolen, Christopher R.; Humphrey, Kathryn; Nielsen, Tina G.; Penuel, Elicia; Paulson, Joseph N.

Prognostic mutational subtyping in de novo diffuse large B-cell lymphoma

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Springer Science and Business Media LLC, 2022

Published in: BMC Cancer
Herrera, Alex F.; Tracy, Samuel; Croft, Brandon; Opat, Stephen; Ray, Jill; Lovejoy, Alex F.; Musick, Lisa; Paulson, Joseph N.; Sehn, Laurie H.; Jiang, Yanwen

Risk profiling of patients with relapsed/refractory diffuse large B-cell lymphoma by measuring circulating tumor DNA

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American Society of Hematology, 2022

Published in: Blood Advances
Vestal, Nicole L.; Mandelbaum, Rachel S.; Matsuzaki, Shinya; Sangara, Rauvynne N.; Bainvoll, Liat; Ouzounian, Joseph G.; Paulson, Richard J.; Matsuo, Koji

ASSISTED REPRODUCTIVE TECHNOLOGY AND INCREASED ABNORMAL PLACENTATION: A POPULATION-BASED ANALYSIS

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Elsevier BV, 2021

Published in: Fertility and Sterility
Hsiao, Chiaowen Joyce; Paulson, Joseph N.; Singh, Sarabdeep; Mongodin, Emmanuel F.; Carroll, Karen C.; Fraser, Claire M.; Rock, Peter; Faraday, Nauder

Nasal Microbiota and Infectious Complications After Elective Surgical Procedures

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American Medical Association (AMA), 2021

Published in: JAMA Network Open
Peterson, Mallory R.; Cherukuri, Venkateswararao; Paulson, Joseph N.; Ssentongo, Paddy; Kulkarni, Abhaya V.; Warf, Benjamin C.; Monga, Vishal; Schiff, Steven J.

Normal childhood brain growth and a universal sex and anthropomorphic relationship to cerebrospinal fluid

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Journal of Neurosurgery Publishing Group (JNSPG), 2021

Published in: Journal of Neurosurgery: Pediatrics
Huang, Huang; Datye, Asim; Fan, Ming; Knapp, Andrea; Balakrishnan, Rama; Balasubramanian, Sandhya; Chae, Julia; Roth, Emma; Nielsen, Tina; Paulson, Joseph N.; Trask, Peter

Abstract 2035: Listen to the patients: Assessing the prognostic value of pre-treatment health-related quality of life in 1L DLBCL patients

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American Association for Cancer Research (AACR), 2020

Published in: Cancer Research
Hehnly, Christine; Zhang, Lijun; Paulson, Joseph N.; Almeida, Mathieu; von Bredow, Benjamin; Wijetunge, Dona S. S.; Galperin, Michael Y.; Sheldon, Kathryn; Schiff, Steven J.; Broach, James R.

Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156

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American Society for Microbiology, 2020

Published in: Microbiology Resource Announcements
Henneges, Carsten; Jin, Dexter X; Venstrom, Jeffrey M; Trabucco, Sally E; Nielsen, Tina G; Penuel, Elicia M.; Huet, Sarah; Salles, Gilles; Paulson, Joseph N

Neoantigens in Patients with De Novo Follicular Lymphoma: Results from the PRIMA Study

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American Society of Hematology, 2020

Published in: Blood
Herrera, Alex F.; Tracy, Samuel; Croft, Brandon; Opat, Stephen; Ray, Jill; Musick, Lisa; Paulson, Joseph N.; Sehn, Laurie H.; Jiang, Yanwen

Risk Profiling of Relapsed/Refractory Diffuse Large B-Cell Lymphoma Patients By Measuring Circulating Tumor DNA

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American Society of Hematology, 2020

Published in: Blood
Lopes-Ramos, Camila M.; Chen, Cho-Yi; Kuijjer, Marieke L.; Paulson, Joseph N.; Sonawane, Abhijeet R.; Fagny, Maud; Platig, John; Glass, Kimberly; Quackenbush, John; DeMeo, Dawn L.

Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues

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Elsevier BV, 2020

Published in: Cell Reports
Shapiro, Lori R.; Paulson, Joseph N.; Arnold, Brian J.; Scully, Erin D.; Zhaxybayeva, Olga; Pierce, Naomi E.; Rocha, Jorge; Klepac-Ceraj, Vanja; Holton, Kristina; Kolter, Roberto

An Introduced Crop Plant Is Driving Diversification of the Virulent Bacterial Pathogen Erwinia tracheiphila

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American Society for Microbiology, 2018

Published in: mBio
Fagny, Maud; Paulson, Joseph N.; Kuijjer, Marieke L.; Sonawane, Abhijeet R.; Chen, Cho-Yi; Lopes-Ramos, Camila M.; Glass, Kimberly; Quackenbush, John; Platig, John

Exploring regulation in tissues with eQTL networks

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Proceedings of the National Academy of Sciences, 2017

Published in: Proceedings of the National Academy of Sciences

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