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Divekar, Ashutosh G; Park, Andrew Michael; Owczarczyk, Zbyslaw R.; Pivovar, Bryan S; Herring, Andrew M

Pfaem: A Novel Anionic Exchange Membrane for Fuel Cell Applications and Its Characterization

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The Electrochemical Society, 2016

Published in: ECS Meeting Abstracts
Chiang, Zachary; Vastermark, Ake; Punta, Marco; Coggill, Penelope C.; Mistry, Jaina; Finn, Robert D.; Saier, Milton H.

The complexity, challenges and benefits of comparing two transporter classification systems in TCDB and Pfam

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Oxford University Press (OUP), 2015

Published in: Briefings in Bioinformatics
Gehne, N; Haseloff, RF; Blasig, IE

Identity crisis in the PMP-22/EMP/MP20/Claudin superfamily (Pfam00822)

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Informa UK Limited, 2015

Published in: Tissue Barriers
Balech, Bachir; Vicario, Saverio; Donvito, Giacinto; Monaco, Alfonso; Notarangelo, Pasquale; Pesole, Graziano

MSA-PAD: DNA multiple sequence alignment framework based on PFAM accessed domain information

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Oxford University Press (OUP), 2015

Published in: Bioinformatics
Kruger, Felix A.; Gaulton, Anna; Nowotka, Michal; Overington, John P.

PPDMs—a resource for mapping small molecule bioactivities from ChEMBL to Pfam-A protein domains

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Oxford University Press (OUP), 2015

Published in: Bioinformatics
Finn, Robert D.; Miller, Benjamin L.; Clements, Jody; Bateman, Alex

iPfam: a database of protein family and domain interactions found in the Protein Data Bank

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Oxford University Press (OUP), 2014

Published in: Nucleic Acids Research
Kumar, Ravindra; Jain, Sohni; Kumari, Bandana; Kumar, Manish

Protein Sub-Nuclear Localization Prediction Using SVM and Pfam Domain Information

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Public Library of Science (PLoS), 2014

Published in: PLoS ONE
Williams, Robert W; Xue, Bin; Uversky, Vladimir N; Dunker, A Keith

Distribution and cluster analysis of predicted intrinsically disordered protein Pfam domains

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Informa UK Limited, 2013

Published in: Intrinsically Disordered Proteins
Mistry, Jaina; Kloppmann, Edda; Rost, Burkhard; Punta, Marco

An estimated 5% of new protein structures solved today represent a new Pfam family

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International Union of Crystallography (IUCr), 2013

Published in: Acta Crystallographica Section D Biological Crystallography
Coggill, Penelope; Eberhardt, Ruth Y; Finn, Robert D; Chang, Yuanyuan; Jaroszewski, Lukasz; Godzik, Adam; Das, Debanu; Xu, Qingping; Axelrod, Herbert L; Aravind, L; Murzin, Alexey G; Bateman, Alex

Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila

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Springer Science and Business Media LLC, 2013

Published in: BMC Bioinformatics
Xu, Qifang; Dunbrack, Roland L.

Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB

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Oxford University Press (OUP), 2012

Published in: Bioinformatics
Cheng, Chongyun; Shaw, Neil; Zhang, Xuejun; Zhang, Min; Ding, Wei; Wang, Bi-Cheng; Liu, Zhi-Jie

Structural View of a Non Pfam Singleton and Crystal Packing Analysis

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Public Library of Science (PLoS), 2012

Published in: PLoS ONE
Williams, Robert W.; Xue, Bin; Uversky, Vladimir; Dunker, A. Keith

Natural Selection of 100% Intrinsically Disordered Biologically Functional Disease Related Pfam Protein Domains

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Elsevier BV, 2011

Published in: Biophysical Journal
Tamuri, Asif U.; Laskowski, Roman A.

ArchSchema: a tool for interactive graphing of related Pfam domain architectures

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Oxford University Press (OUP), 2010

Published in: Bioinformatics
Finn, Robert D.; Marshall, Mhairi; Bateman, Alex

iPfam: visualization of protein–protein interactions in PDB at domain and amino acid resolutions

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Oxford University Press (OUP), 2005

Published in: Bioinformatics
Yang, H.; Chang, J.; Shah, A.; Ng, J.; Tempel, W.; Schubot, F.; Liu, Z.-J.; Rose, J.; Wang, B.-C.

Crystal structure ofPfu838710: the first model of a Pfam CYTH domain

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International Union of Crystallography (IUCr), 2005

Published in: Acta Crystallographica Section A Foundations of Crystallography
Chandonia, John‐Marc; Brenner, Steven E.

Implications of structural genomics target selection strategies: Pfam5000, whole genome, and random approaches

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Wiley, 2005

Published in: Proteins: Structure, Function, and Bioinformatics
Hiller, M.

Non-EST based prediction of exon skipping and intron retention events using Pfam information

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Oxford University Press (OUP), 2005

Published in: Nucleic Acids Research
Chukkapalli, G.; Guda, C.; Subramaniam, S.

SledgeHMMER: a web server for batch searching the Pfam database

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Oxford University Press (OUP), 2004

Published in: Nucleic Acids Research
Studholme, David J; Rawlings, Neil D; Barrett, Alan J; Bateman, Alex

A comparison of Pfam and MEROPS: Two databases, one comprehensive, and one specialised

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Springer Science and Business Media LLC, 2003

Published in: BMC Bioinformatics

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