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  1. Budczies, Jan [Author]; Stenzinger, Albrecht [Author]

    cancerclass : an R package for development and validation of diagnostic tests from high-dimensional molecular data

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    July 2014

    Published in: Journal of statistical software ; 59(2014), 1, Seite 1-19

  2. Budczies, Jan [Author]; Schirmacher, Peter [Author]; Stenzinger, Albrecht [Author]

    Chromosome 9p copy number gains involving PD-L1 are associated with a specific proliferation and immune-modulating gene expression program active across major cancer types

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    London: BioMed Central, 06 December 2017

  3. Steven, André [Author]; Friedrich, Michael [Author]; Jank, Paul [Author]; Heimer, Nadine [Author]; Budczies, Jan [Author]; Denkert, Carsten [Author]; Seliger, Barbara [Author]

    What turns CREB on? And off? And why does it matter?

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    2020

    Published in: Cellular and molecular life sciences ; 77(2020), 20, Seite 4049-4067

  4. Stenzinger, Albrecht [Author]; Edsjö, Anders [Author]; Plöger, Carolin [Author]; Friedman, Mikaela [Author]; Fröhling, Stefan [Author]; Wirta, Valtteri [Author]; Seufferlein, Thomas [Author]; Botling, Johan [Author]; Duyster, Justus [Author]; Akhras, Michael [Author]; Thimme, Robert [Author]; Fioretos, Thoas [Author]; Bitzer, Michael [Author]; Cavelier, Lucia [Author]; Schirmacher, Peter [Author]; Malek, Nisar [Author]; Rosenquist, Richard [Author]; Lindstrand, Anna [Author]; Wedell, Anna [Author]; Gisselsson, David [Author]; Melén, Erik [Author]; Helenius, Gisela [Author]; Ehrencrona, Hans [Author]; Engstrand, Lars [Author]; [...]

    Trailblazing precision medicine in Europe : A joint view by Genomic Medicine Sweden and the Centers for Personalized Medicine, ZPM, in Germany

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    25 June 2022

    Published in: Seminars in cancer biology ; 84(2022), Seite 242-254

  5. Menzel, Michael [Author]; Kirchner, Martina [Author]; Kluck, Klaus [Author]; Ball, Markus [Author]; Beck, Susanne [Author]; Allgäuer, Michael [Author]; Assmann, Christin [Author]; Schnorbach, Johannes [Author]; Volckmar, Anna-Lena [Author]; Tay, Timothy Kwang Yong [Author]; Goldschmid, Hannah [Author]; Tan, Daniel SW [Author]; Thomas, Michael [Author]; Kazdal, Daniel [Author]; Budczies, Jan [Author]; Stenzinger, Albrecht [Author]; Christopoulos, Petros [Author]

    Genomic heterogeneity at baseline is associated with T790M resistance mutations in EGFR-mutated lung cancer treated with the first-/second-generation tyrosine kinase inhibitors

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    March 2024

    Published in: The journal of pathology: clinical research ; 10(2024), 2 vom: März, Artikel-ID e354, Seite 1-10

  6. Menzel, Michael [Author]; Endris, Volker [Author]; Schwab, Constantin [Author]; Kluck, Klaus [Author]; Neumann, Olaf [Author]; Beck, Susanne [Author]; Ball, Markus [Author]; Schaaf, Christian P. [Author]; Fröhling, Stefan [Author]; Lichtner, Peter [Author]; Schirmacher, Peter [Author]; Kazdal, Daniel [Author]; Stenzinger, Albrecht [Author]; Budczies, Jan [Author]

    Accurate tumor purity determination is critical for the analysis of homologous recombination deficiency (HRD)

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    September 2023

    Published in: Translational oncology ; 35(2023) vom: Sept., Artikel-ID 101706, Seite 1-10

  7. Stenzinger, Albrecht [Author]; Alber, Maximilian [Author]; Allgäuer, Michael [Author]; Jurmeister, Philipp [Author]; Bockmayr, Michael [Author]; Budczies, Jan [Author]; Lennerz, Jochen [Author]; Eschrich, Johannes [Author]; Kazdal, Daniel [Author]; Schirmacher, Peter [Author]; Wagner, Alex H. [Author]; Tacke, Frank [Author]; Capper, David [Author]; Müller, Klaus-Robert [Author]; Klauschen, Frederick [Author]

    Artificial intelligence and pathology : from principles to practice and future applications in histomorphology and molecular profiling

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    September 2022

    Published in: Seminars in cancer biology ; 84(2022), Seite 129-143

  8. Rempel, Eugen [Author]; Kluck, Klaus [Author]; Beck, Susanne [Author]; Ourailidis, Iordanis [Author]; Kazdal, Daniel [Author]; Neumann, Olaf [Author]; Volckmar, Anna-Lena [Author]; Kirchner, Martina [Author]; Goldschmid, Hannah [Author]; Pfarr, N. [Author]; Weichert, Wilko [Author]; Hübschmann, Daniel [Author]; Fröhling, Stefan [Author]; Sutter, Christian [Author]; Schaaf, Christian P. [Author]; Schirmacher, Peter [Author]; Endris, Volker [Author]; Stenzinger, Albrecht [Author]; Budczies, Jan [Author]

    Pan-cancer analysis of genomic scar patterns caused by homologous repair deficiency (HRD)

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    09 June 2022

    Published in: npj precision oncology ; 6(2022), Artikel-ID 36, Seite 1-13

  9. Budczies, Jan [Author]; Kirchner, Martina [Author]; Kluck, Klaus [Author]; Kazdal, Daniel [Author]; Glade, Julia [Author]; Allgäuer, Michael [Author]; Kriegsmann, Mark [Author]; Heußel, Claus Peter [Author]; Herth, Felix [Author]; Winter, Hauke [Author]; Meister, Michael [Author]; Muley, Thomas [Author]; Fröhling, Stefan [Author]; Peters, Solange [Author]; Seliger, Barbara [Author]; Schirmacher, Peter [Author]; Thomas, Michael [Author]; Christopoulos, Petros [Author]; Stenzinger, Albrecht [Author]

    A gene expression signature associated with B cells predicts benefit from immune checkpoint blockade in lung adenocarcinoma

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    11 January 2021

    Published in: OncoImmunology ; 10(2021), Artikel-ID 1860586, Seite 1-14

  10. Talla, Suranand Babu [Author]; Rempel, Eugen [Author]; Endris, Volker [Author]; Jenzer, Maximilian [Author]; Allgäuer, Michael [Author]; Schwab, Constantin [Author]; Kazdal, Daniel [Author]; Stögbauer, Fabian [Author]; Volckmar, Anna-Lena [Author]; Kocsmar, Ildiko [Author]; Neumann, Olaf [Author]; Schirmacher, Peter [Author]; Zschäbitz, Stefanie [Author]; Duensing, Stefan [Author]; Budczies, Jan [Author]; Stenzinger, Albrecht [Author]; Kirchner, Martina [Author]

    Immuno-oncology gene expression profiling of formalin-fixed and paraffin-embedded clear cell renal cell carcinoma : Performance comparison of the NanoString nCounter technology with targeted RNA sequencing

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    2020

    Published in: Genes, chromosomes & cancer ; 59(2020), 7, Seite 406-416

  11. Horak, Peter [Author]; Leichsenring, Jonas [Author]; Goldschmid, Hannah [Author]; Kreutzfeldt, Simon [Author]; Kazdal, Daniel [Author]; Teleanu, Maria-Veronica [Author]; Endris, Volker [Author]; Gieldon, Laura [Author]; Allgäuer, Michael [Author]; Volckmar, Anna-Lena [Author]; Dikow, Nicola [Author]; Renner, Marcus [Author]; Kirchner, Martina [Author]; Penzel, Roland [Author]; Plöger, Carolin [Author]; Brandt, Regine [Author]; Şeker-Cin, Huriye [Author]; Budczies, Jan [Author]; Heilig, Christoph E. [Author]; Neumann, Olaf [Author]; Schaaf, Christian P. [Author]; Schirmacher, Peter [Author]; Fröhling, Stefan [Author]; Stenzinger, Albrecht [Author]

    Assigning evidence to actionability : an introduction to variant interpretation in precision cancer medicine

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    June 2022

    Published in: Genes, chromosomes & cancer ; 61(2022), 6, 6, Seite 303-313

  12. Budczies, Jan [Author]; Kirchner, Martina [Author]; Kluck, Klaus [Author]; Kazdal, Daniel [Author]; Glade, Julia [Author]; Allgäuer, Michael [Author]; Kriegsmann, Mark [Author]; Heußel, Claus Peter [Author]; Herth, Felix [Author]; Winter, Hauke [Author]; Meister, Michael [Author]; Muley, Thomas [Author]; Goldmann, Torsten [Author]; Fröhling, Stefan [Author]; Wermke, Martin [Author]; Waller, Cornelius [Author]; Tufman, Amanda L. H. [Author]; Reck, Martin [Author]; Peters, Solange [Author]; Schirmacher, Peter [Author]; Thomas, Michael [Author]; Christopoulos, Petros [Author]; Stenzinger, Albrecht [Author]

    Deciphering the immunosuppressive tumor microenvironment in ALK- and EGFR-positive lung adenocarcinoma

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    Berlin; Heidelberg: Springer, 2021

    Published in: Cancer immunology immunotherapy ; 71 (2021), 251–265

  13. Budczies, Jan [Author]; Kirchner, Martina [Author]; Kluck, Klaus [Author]; Kazdal, Daniel [Author]; Glade, Julia [Author]; Allgäuer, Michael [Author]; Kriegsmann, Mark [Author]; Heußel, Claus Peter [Author]; Herth, Felix [Author]; Winter, Hauke [Author]; Meister, Michael [Author]; Muley, Thomas [Author]; Goldmann, Torsten [Author]; Fröhling, Stefan [Author]; Wermke, Martin [Author]; Waller, Cornelius [Author]; Tufman, Amanda L. H. [Author]; Reck, Martin [Author]; Peters, Solange [Author]; Schirmacher, Peter [Author]; Thomas, Michael [Author]; Christopoulos, Petros [Author]; Stenzinger, Albrecht [Author]

    Deciphering the immunosuppressive tumor microenvironment in ALK- and EGFR-positive lung adenocarcinoma

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    14 June 2021

    Published in: Cancer immunology immunotherapy ; 71(2022), 2, Seite 251-265

  14. Kirchner, Martina [Author]; Neumann, Olaf [Author]; Volckmar, Anna-Lena [Author]; Stögbauer, Fabian [Author]; Allgäuer, Michael [Author]; Kazdal, Daniel [Author]; Budczies, Jan [Author]; Rempel, Eugen [Author]; Brandt, Regine [Author]; Talla, Suranand Babu [Author]; Winterfeld, Moritz von [Author]; Leichsenring, Jonas [Author]; Bochtler, Tilmann [Author]; Krämer, Alwin [Author]; Springfeld, Christoph [Author]; Schirmacher, Peter [Author]; Penzel, Roland [Author]; Endris, Volker [Author]; Stenzinger, Albrecht [Author]

    RNA-based detection of gene fusions in formalin-fixed and paraffin-embedded solid cancer samples

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    5 September 2019

    Published in: Cancers ; 11(2019,9) Artikel-Nummer 1309, 17 Seiten

  15. Menzel, Michael [Author]; Ossowski, Stephan [Author]; Kral, Sebastian [Author]; Metzger, Patrick [Author]; Horak, Peter [Author]; Marienfeld, Ralf [Author]; Börries, Melanie [Author]; Wolter, Steffen [Author]; Ball, Markus [Author]; Neumann, Olaf [Author]; Armeanu-Ebinger, Sorin [Author]; Schroeder, Christopher [Author]; Matysiak, Uta [Author]; Goldschmid, Hannah [Author]; Schipperges, Vincent [Author]; Fürstberger, Axel [Author]; Allgäuer, Michael [Author]; Eberhardt, Timo [Author]; Niewöhner, Jakob [Author]; Blaumeiser, Andreas [Author]; Plöger, Carolin [Author]; Haack, Tobias [Author]; Tay, Timothy Kwang Yong [Author]; Kelemen, Olga [Author]; [...]

    Multicentric pilot study to standardize clinical whole exome sequencing (WES) for cancer patients

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    20 October 2023

    Published in: npj precision oncology ; 7(2023), Seite 1-11