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Li, Xiang [Author]; Wu, Fan [Author]; Günther, Stefan [Author]; Looso, Mario [Author]; Kuenne, Carsten [Author]; Zhang, Ting [Author]; Wiesnet, Marion [Author]; Klatt, Stephan [Author]; Zukunft, Sven [Author]; Fleming, Ingrid [Author]; Poschet, Gernot [Author]; Wietelmann, Astrid [Author]; Atzberger, Ann [Author]; Potente, Michael [Author]; Yuan, Xuejun [Author]; Braun, Thomas [Author]

Inhibition of fatty acid oxidation enables heart regeneration in adult mice

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27 September 2023

Published in: Nature ; 622(2023), 7983, Seite 619-626, [20], 1-5
Ustjanzew, Arsenij; Preussner, Jens; Bentsen, Mette; Kuenne, Carsten; Looso, Carsten

i2dash: Creation of Flexible, Interactive, and Web-Based Dashboards for Visualization of Omics Data

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Oxford University Press (OUP), 2022

Published in: Genomics, Proteomics & Bioinformatics, 20 (2022) 3, Seite 568-577
Bentsen, Mette; Heger, Vanessa; Schultheis, Hendrik; Kuenne, Carsten; Looso, Mario

TF-COMB – Discovering grammar of transcription factor binding sites

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Elsevier BV, 2022

Published in: Computational and Structural Biotechnology Journal, 20 (2022), Seite 4040-4051
Bayer, Julia; Kuenne, Carsten; Preussner, Jens; Looso, Mario

LimiTT: link miRNAs to targets

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Springer Science and Business Media LLC, 2016

Published in: BMC Bioinformatics, 17 (2016) 1
Preussner, Jens; Bayer, Julia; Kuenne, Carsten; Looso, Mario

ADMIRE: analysis and visualization of differential methylation in genomic regions using the Infinium HumanMethylation450 Assay

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Springer Science and Business Media LLC, 2015

Published in: Epigenetics & Chromatin, 8 (2015) 1
Kuenne, Carsten; Preussner, Jens; Herzog, Mario; Braun, Thomas; Looso, Mario

MIRPIPE: quantification of microRNAs in niche model organisms

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Oxford University Press (OUP), 2014

Published in: Bioinformatics, 30 (2014) 23, Seite 3412-3413
Schultheis, Hendrik; Kuenne, Carsten; Preussner, Jens; Wiegandt, Rene; Fust, Annika; Bentsen, Mette; Looso, Mario

WIlsON: Web-based Interactive Omics VisualizatioN

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Oxford University Press (OUP), 2019

Published in: Bioinformatics, 35 (2019) 6, Seite 1055-1057
Kondili, Maria; Fust, Annika; Preussner, Jens; Kuenne, Carsten; Braun, Thomas; Looso, Mario

UROPA: a tool for Universal RObust Peak Annotation

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Springer Science and Business Media LLC, 2017

Published in: Scientific Reports, 7 (2017) 1
Kuenne, Carsten; Guenther, Stefan; Looso, Mario; Zhang, Ting; Krueger, Marcus; Zhou, Yonggang; Braun, Thomas; Kim, Johnny

RNA-Seq analysis of isolated satellite cells in Prmt5 deficient mice

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Elsevier BV, 2015

Published in: Genomics Data, 5 (2015), Seite 122-125
Fritzenwanker, Moritz; Kuenne, Carsten; Billion, Andre; Hain, Torsten; Zimmermann, Kurt; Goesmann, Alexander; Chakraborty, Trinad; Domann, Eugen

Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431

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American Society for Microbiology, 2013

Published in: Genome Announcements, 1 (2013) 1
Pischimarov, Jordan; Kuenne, Carsten; Billion, André; Hemberger, Jüergen; Cemič, Franz; Chakraborty, Trinad; Hain, Torsten

sRNAdb: A small non-coding RNA database for gram-positive bacteria

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Springer Science and Business Media LLC, 2012

Published in: BMC Genomics, 13 (2012) 1
Imirzalioglu, Can; Dahmen, Heinrich; Hain, Torsten; Billion, Andre; Kuenne, Carsten; Chakraborty, Trinad; Domann, Eugen

Highly Specific and Quick Detection of Mycobacterium avium subsp. paratuberculosis in Feces and Gut Tissue of Cattle and Humans by Multiple Real-Time PCR Assays

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American Society for Microbiology, 2011

Published in: Journal of Clinical Microbiology, 49 (2011) 5, Seite 1843-1852
Kuenne, Carsten; Voget, Sonja; Pischimarov, Jordan; Oehm, Sebastian; Goesmann, Alexander; Daniel, Rolf; Hain, Torsten; Chakraborty, Trinad

Comparative Analysis of Plasmids in the Genus Listeria

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Public Library of Science (PLoS), 2010

Published in: PLoS ONE, 5 (2010) 9, Seite e12511
Domann, Eugen; Hain, Torsten; Ghai, Rohit; Billion, André; Kuenne, Carsten; Zimmermann, Kurt; Chakraborty, Trinad

Comparative genomic analysis for the presence of potential enterococcal virulence factors in the probiotic Enterococcus faecalis strain Symbioflor 1

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Elsevier BV, 2007

Published in: International Journal of Medical Microbiology, 297 (2007) 7-8, Seite 533-539
Beisaw, Arica; Kuenne, Carsten; Guenther, Stefan; Dallmann, Julia; Wu, Chi-Chung; Bentsen, Mette; Looso, Mario; Stainier, Didier Y.R.

AP-1 Contributes to Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion During Zebrafish Heart Regeneration

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Ovid Technologies (Wolters Kluwer Health), 2020

Published in: Circulation Research, 126 (2020) 12, Seite 1760-1778
Bhagwat, Aditya M; Graumann, Johannes; Wiegandt, Rene; Bentsen, Mette; Welker, Jordan; Kuenne, Carsten; Preussner, Jens; Braun, Thomas; Looso, Mario

multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets

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Life Science Alliance, LLC, 2020

Published in: Life Science Alliance, 3 (2020) 11, Seite e202000757
Marass, Michele; Beisaw, Arica; Gerri, Claudia; Luzzani, Francesca; Fukuda, Nana; Günther, Stefan; Kuenne, Carsten; Reischauer, Sven; Stainier, Didier Y. R.

Genome-wide strategies reveal target genes of Npas4l associated with vascular development in zebrafish

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The Company of Biologists, 2019

Published in: Development (2019)
Lai, Jason K.H.; Gagalova, Kristina K.; Kuenne, Carsten; El-Brolosy, Mohamed A.; Stainier, Didier Y.R.

Induction of interferon-stimulated genes and cellular stress pathways by morpholinos in zebrafish

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Elsevier BV, 2019

Published in: Developmental Biology, 454 (2019) 1, Seite 21-28
Kuenne, Carsten; Billion, André; Mraheil, Mobarak Abu; Strittmatter, Axel; Daniel, Rolf; Goesmann, Alexander; Barbuddhe, Sukhadeo; Hain, Torsten; Chakraborty, Trinad

Reassessment of the Listeria monocytogenespan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

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Springer Science and Business Media LLC, 2013

Published in: BMC Genomics, 14 (2013) 1
Shioya, Kouki; Michaux, Charlotte; Kuenne, Carsten; Hain, Torsten; Verneuil, Nicolas; Budin-Verneuil, Aurélie; Hartsch, Thomas; Hartke, Axel; Giard, Jean-Christophe

Genome-Wide Identification of Small RNAs in the Opportunistic Pathogen Enterococcus faecalis V583

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Public Library of Science (PLoS), 2011

Published in: PLoS ONE, 6 (2011) 9, Seite e23948

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