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Trescher, Saskia [Author] ; Leser, Ulf [Contributor]; Nowick, Katja [Contributor]; Siebert, Heike [Contributor]

Estimating Gene Regulatory Activity using Mathematical Optimization

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Humboldt-Universität zu Berlin, 2020-09-28
Walter Costa, Maria Beatriz [Author]; Nowick, Katja [Author]

SSS-test : a novel test for detecting positive selection on RNA secondary structure

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21 March 2019

Published in: BMC bioinformatics ; 20(2019,1), Artikel-Nummer 151, 19 Seiten
Doublet, Vincent [Author]; Pöschl, Yvonne [Author]; Gogol-Döring, Andreas [Author]; Alaux, Cédric [Author]; Annoscia, Desiderato [Author]; Aurori, Christian [Author]; Barribeau, Seth M. [Author]; Bedoya-Reina, Oscar C. [Author]; Brown, Mark J. F. [Author]; Bull, James C. [Author]; Flenniken, Michelle L. [Author]; Galbraith, David A. [Author]; Genersch, Elke [Author]; Gisder, Sebastian [Author]; Große, Ivo [Author]; Holt, Holly L. [Author]; Hultmark, Dan [Author]; Lattorff, H. Michael G. [Author]; Le Conte, Yves [Author]; Manfredini, Fabio [Author]; McMahon, Dino P. [Author]; Moritz, Robin F. A. [Author]; Nazzi, Francesco [Author]; Niño, Elina L. [Author]; [...]

Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens

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2017

Published in: BMC genomics ; 18 (2017), article number 207, 17 Seiten
Berto, Stefano; Nowick, Katja

Species-Specific Changes in a Primate Transcription Factor Network Provide Insights into the Molecular Evolution of the Primate Prefrontal Cortex

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Oxford University Press (OUP), 2018

Published in: Genome Biology and Evolution, 10 (2018) 8, Seite 2023-2036
Gysi, Deisy Morselli; Nowick, Katja

Construction, comparison and evolution of networks in life sciences and other disciplines

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The Royal Society, 2020

Published in: Journal of The Royal Society Interface, 17 (2020) 166, Seite 20190610
Perdomo-Sabogal, Álvaro; Nowick, Katja

Genetic Variation in Human Gene Regulatory Factors Uncovers Regulatory Roles in Local Adaptation and Disease

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Oxford University Press (OUP), 2019

Published in: Genome Biology and Evolution, 11 (2019) 8, Seite 2178-2193
Andrés, Aida M; Nowick, Katja

Editorial overview: Genetics of human evolution: The genetics of human origins

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Elsevier BV, 2014

Published in: Current Opinion in Genetics & Development, 29 (2014), Seite v-vii
Bajić, Vladimir; Schulmann, Vanessa Hava; Nowick, Katja

mtDNA “nomenclutter” and its consequences on the interpretation of genetic data

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Springer Science and Business Media LLC, 2024

Published in: BMC Ecology and Evolution, 24 (2024) 1
Triant, Deborah A.; Nowick, Katja; Shelest, Ekaterina

Editorial: Gene Regulation as a Driver of Adaptation and Speciation

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Frontiers Media SA, 2021

Published in: Frontiers in Genetics, 12 (2021)
Voigt, André; Nowick, Katja; Almaas, Eivind

A composite network of conserved and tissue specific gene interactions reveals possible genetic interactions in glioma

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Public Library of Science (PLoS), 2017

Published in: PLOS Computational Biology, 13 (2017) 9, Seite e1005739
Nowick, Katja; Carneiro, Miguel; Faria, Rui

A prominent role of KRAB-ZNF transcription factors in mammalian speciation?

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Elsevier BV, 2013

Published in: Trends in Genetics, 29 (2013) 3, Seite 130-139
Mahmudi, Owais; Sennblad, Bengt; Arvestad, Lars; Nowick, Katja; Lagergren, Jens

Gene-pseudogene evolution: a probabilistic approach

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Springer Science and Business Media LLC, 2015

Published in: BMC Genomics, 16 (2015) S10
Nowick, Katja; Gernat, Tim; Almaas, Eivind; Stubbs, Lisa

Differences in human and chimpanzee gene expression patterns define an evolving network of transcription factors in brain

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Proceedings of the National Academy of Sciences, 2009

Published in: Proceedings of the National Academy of Sciences, 106 (2009) 52, Seite 22358-22363
Nowick, Katja; Walter Costa, Maria Beatriz; Höner zu Siederdissen, Christian; Stadler, Peter F

Selection Pressures on RNA Sequences and Structures

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SAGE Publications, 2019

Published in: Evolutionary Bioinformatics, 15 (2019)
Walter Costa, Maria Beatriz; Höner zu Siederdissen, Christian; Dunjić, Marko; Stadler, Peter F.; Nowick, Katja

SSS-test: a novel test for detecting positive selection on RNA secondary structure

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Springer Science and Business Media LLC, 2019

Published in: BMC Bioinformatics, 20 (2019) 1
Gysi, Deisy Morselli; Voigt, Andre; Fragoso, Tiago de Miranda; Almaas, Eivind; Nowick, Katja

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool

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Springer Science and Business Media LLC, 2018

Published in: BMC Bioinformatics, 19 (2018) 1
Berto, Stefano; Perdomo-Sabogal, Alvaro; Gerighausen, Daniel; Qin, Jing; Nowick, Katja

A Consensus Network of Gene Regulatory Factors in the Human Frontal Lobe

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Frontiers Media SA, 2016

Published in: Frontiers in Genetics, 7 (2016)
Laubichler, Manfred D.; Stadler, Peter F.; Prohaska, Sonja J.; Nowick, Katja

The relativity of biological function

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Springer Science and Business Media LLC, 2015

Published in: Theory in Biosciences, 134 (2015) 3-4, Seite 143-147
Perdomo-Sabogal, Alvaro; Kanton, Sabina; Walter, Maria Beatriz C.; Nowick, Katja

The role of gene regulatory factors in the evolutionary history of humans

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Elsevier BV, 2014

Published in: Current Opinion in Genetics & Development, 29 (2014), Seite 60-67
Nowick, Katja; Fields, Christopher; Gernat, Tim; Caetano-Anolles, Derek; Kholina, Nadezda; Stubbs, Lisa

Gain, Loss and Divergence in Primate Zinc-Finger Genes: A Rich Resource for Evolution of Gene Regulatory Differences between Species

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Public Library of Science (PLoS), 2011

Published in: PLoS ONE, 6 (2011) 6, Seite e21553

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