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Pugliese, Giusj Monia [Author]; Venafra, Veronica [Author]; Bica, Valeria [Author]; Massacci, Giorgia [Author]; Latini, Sara [Author]; Graziosi, Simone [Author]; Fischer, Thomas [Author]; Mougiakakos, Dimitrios [Author]; Boettcher, Martin [Author]; Perfetto, Livia [Author]; Sacco, Francesca [Author]

Impact of FLT3-ITD location on cytarabine sensitivity in AML : a network-based approach. Letter

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2023

Published in: Leukemia ; 37(2023), 5, Seite 1151-1155
Massacci, Giorgia [Author]; Venafra, Veronica [Author]; Latini, Sara [Author]; Bica, Valeria [Author]; Pugliese, Giusj Monia [Author]; Graziosi, Simone [Author]; Klingelhuber, Felix [Author]; Krahmer, Natalie [Author]; Fischer, Thomas [Author]; Mougiakakos, Dimitrios [Author]; Boettcher, Martin [Author]; Perfetto, Livia [Author]; Sacco, Francesca [Author]

A key role of the WEE1-CDK1 axis in mediating TKI-therapy resistance in FLT3-ITD positive acute myeloid leukemia patients

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2023

Published in: Leukemia ; 37(2023), 2, Seite 288-297
Niarakis, Anna [Author]; Ostaszewski, Marek [Author]; Mazein, Alexander [Author]; Kuperstein, Inna [Author]; Kutmon, Martina [Author]; Gillespie, Marc E. [Author]; Funahashi, Akira [Author]; Acencio, Marcio Luis [Author]; Hemedan, Ahmed [Author]; Aichem, Michael [Author]; Klein, Karsten [Author]; Czauderna, Tobias [Author]; Burtscher, Felicia [Author]; Yamada, Takahiro G. [Author]; Hiki, Yusuke [Author]; Hiroi, Noriko F. [Author]; Hu, Finterly [Author]; Pham, Nhung [Author]; Ehrhart, Friederike [Author]; Willighagen, Egon L. [Author]; Valdeolivas, Alberto [Author]; Dugourd, Aurélien [Author]; Messina, Francesco [Author]; Esteban-Medina, Marina [Author]; [...]

Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches

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13 February 2024

Published in: Frontiers in immunology ; 14(2024), Artikel-ID 1282859, Seite 1-24
Massacci, Giorgia; Perfetto, Livia; Sacco, Francesca

The Cyclin-dependent kinase 1: more than a cell cycle regulator

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Springer Science and Business Media LLC, 2023

Published in: British Journal of Cancer, 129 (2023) 11, Seite 1707-1716
Cesareni, Gianni; Sacco, Francesca; Perfetto, Livia

Assembling Disease Networks From Causal Interaction Resources

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Frontiers Media SA, 2021

Published in: Frontiers in Genetics, 12 (2021)
Sacco, Francesca; Perfetto, Livia; Cesareni, Gianni

Combining Phosphoproteomics Datasets and Literature Information to Reveal the Functional Connections in a Cell Phosphorylation Network

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Wiley, 2018

Published in: PROTEOMICS, 18 (2018) 5-6
De Marinis, Ilaria; Lo Surdo, Prisca; Cesareni, Gianni; Perfetto, Livia

SIGNORApp: a Cytoscape 3 application to access SIGNOR data

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Oxford University Press (OUP), 2022

Published in: Bioinformatics, 38 (2022) 6, Seite 1764-1766
Lo Surdo, Prisca; Calderone, Alberto; Cesareni, Gianni; Perfetto, Livia

SIGNOR: A Database of Causal Relationships Between Biological Entities—A Short Guide to Searching and Browsing

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Wiley, 2017

Published in: Current Protocols in Bioinformatics, 58 (2017) 1
Sacco, Francesca; Perfetto, Livia; Castagnoli, Luisa; Cesareni, Gianni

The human phosphatase interactome: An intricate family portrait

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Wiley, 2012

Published in: FEBS Letters, 586 (2012) 17, Seite 2732-2739
Simona, Panni; Panneerselvam, Kalpana; Porras, Pablo; Duesbury, Margaret; Perfetto, Livia; Licata, Luana; Hermjakob, Henning; Orchard, Sandra

The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study

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Oxford University Press (OUP), 2023

Published in: Database, 2023 (2023)
Lo Surdo, Prisca; Iannuccelli, Marta; Contino, Silvia; Castagnoli, Luisa; Licata, Luana; Cesareni, Gianni; Perfetto, Livia

SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update

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Oxford University Press (OUP), 2023

Published in: Nucleic Acids Research, 51 (2023) D1, Seite D631-D637
Iannuccelli, Marta; Lo Surdo, Prisca; Licata, Luana; Castagnoli, Luisa; Cesareni, Gianni; Perfetto, Livia

A Resource to Infer Molecular Paths Linking Cancer Mutations to Perturbation of Cell Metabolism

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Frontiers Media SA, 2022

Published in: Frontiers in Molecular Biosciences, 9 (2022)
Pugliese, Giusj Monia; Latini, Sara; Massacci, Giorgia; Perfetto, Livia; Sacco, Francesca

Combining Mass Spectrometry-Based Phosphoproteomics with a Network-Based Approach to Reveal FLT3-Dependent Mechanisms of Chemoresistance

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MDPI AG, 2021

Published in: Proteomes, 9 (2021) 2, Seite 19
Perfetto, Livia; Gherardini, Pier Federico; Davey, Norman E.; Diella, Francesca; Helmer-Citterich, Manuela; Cesareni, Gianni

Exploring the diversity of SPRY/B30.2-mediated interactions

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Elsevier BV, 2013

Published in: Trends in Biochemical Sciences, 38 (2013) 1, Seite 38-46
Palma, Alessandro; Iannuccelli, Marta; Rozzo, Ilaria; Licata, Luana; Perfetto, Livia; Massacci, Giorgia; Castagnoli, Luisa; Cesareni, Gianni; Sacco, Francesca

Integrating Patient-Specific Information into Logic Models of Complex Diseases: Application to Acute Myeloid Leukemia

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MDPI AG, 2021

Published in: Journal of Personalized Medicine, 11 (2021) 2, Seite 117
Iannuccelli, Marta; Micarelli, Elisa; Surdo, Prisca Lo; Palma, Alessandro; Perfetto, Livia; Rozzo, Ilaria; Castagnoli, Luisa; Licata, Luana; Cesareni, Gianni

CancerGeneNet: linking driver genes to cancer hallmarks

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Oxford University Press (OUP), 2020

Published in: Nucleic Acids Research, 48 (2020) D1, Seite D416-D421
Lo Surdo, Prisca; Calderone, Alberto; Iannuccelli, Marta; Licata, Luana; Peluso, Daniele; Castagnoli, Luisa; Cesareni, Gianni; Perfetto, Livia

DISNOR: a disease network open resource

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Oxford University Press (OUP), 2018

Published in: Nucleic Acids Research, 46 (2018) D1, Seite D527-D534
Chatr-aryamontri, Andrew; Winter, Andrew; Perfetto, Livia; Briganti, Leonardo; Licata, Luana; Iannuccelli, Marta; Castagnoli, Luisa; Cesareni, Gianni; Tyers, Mike

Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases

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Springer Science and Business Media LLC, 2011

Published in: BMC Bioinformatics, 12 (2011) S8
Ceol, Arnaud; Chatr Aryamontri, Andrew; Licata, Luana; Peluso, Daniele; Briganti, Leonardo; Perfetto, Livia; Castagnoli, Luisa; Cesareni, Gianni

MINT, the molecular interaction database: 2009 update

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Oxford University Press (OUP), 2010

Published in: Nucleic Acids Research, 38 (2010) suppl_1, Seite D532-D539
Iannuccelli, Marta; Vitriolo, Alessandro; Licata, Luana; Lo Surdo, Prisca; Contino, Silvia; Cheroni, Cristina; Capocefalo, Daniele; Castagnoli, Luisa; Testa, Giuseppe; Cesareni, Gianni; Perfetto, Livia

Correction: Curation of causal interactions mediated by genes associated with autism accelerates the understanding of gene-phenotype relationships underlying neurodevelopmental disorders

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Springer Science and Business Media LLC, 2024

Published in: Molecular Psychiatry (2024)

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