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Ibrahim, Bashar [Author]; Arkhipova, Ksenia [Author]; Andeweg, Arno C. [Author]; Posada-Céspedes, Susana [Author]; Enault, François [Author]; Gruber, Arthur [Author]; Koonin, Eugene V. [Author]; Kupczok, Anne [Author]; Lemey, Philippe [Author]; McHardy, Alice [Author]; McMahon, Dino P. [Author]; Pickett, Brett E. [Author]; Robertson, David L. [Author]; Scheuermann, Richard H. [Author]; Zhernakova, Alexandra [Author]; Zwart, Mark P. [Author]; Schönhuth, Alexander [Author]; Dutilh, Bas E. [Author]; Marz, Manuela [Author]

Bioinformatics Meets Virology : The European Virus Bioinformatics Center's Second Annual Meeting

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Basel: MDPI, 14 May 2018

Published in: Viruses ; 10, 5 (2018), 256
Wijmenga, Cisca; Zhernakova, Alexandra

The importance of cohort studies in the post-GWAS era

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Springer Science and Business Media LLC, 2018

Published in: Nature Genetics, 50 (2018) 3, Seite 322-328
Spreckels, Johanne E.; Zhernakova, Alexandra

Milk and bugs educate infant immune systems

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Elsevier BV, 2021

Published in: Immunity, 54 (2021) 8, Seite 1633-1635
Weersma, Rinse K; Zhernakova, Alexandra; Fu, Jingyuan

Interaction between drugs and the gut microbiome

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BMJ, 2020

Published in: Gut, 69 (2020) 8, Seite 1510-1519
Nikolaychuk, Pavel Anatolyevich; Zhernakova, Alexandra Olegovna; Enova, Yuiliya Andreevna

Sustainable Corrosion Inhibition of Mild Steel in Hydrochloric Acid Using Extracts of Phaseolus Vulgaris and Vicia Faba

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International Information and Engineering Technology Association, 2023

Published in: Annales de Chimie - Science des Matériaux, 47 (2023) 6, Seite 405-410
Chen, Lianmin; Garmaeva, Sanzhima; Zhernakova, Alexandra; Fu, Jingyuan; Wijmenga, Cisca

A system biology perspective on environment–host–microbe interactions

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Oxford University Press (OUP), 2018

Published in: Human Molecular Genetics, 27 (2018) R2, Seite R187-R194
Matzaraki, Vasiliki; Kumar, Vinod; Wijmenga, Cisca; Zhernakova, Alexandra

The MHC locus and genetic susceptibility to autoimmune and infectious diseases

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Springer Science and Business Media LLC, 2017

Published in: Genome Biology, 18 (2017) 1
Zhernakova, Alexandra; van Diemen, Cleo C.; Wijmenga, Cisca

Detecting shared pathogenesis from the shared genetics of immune-related diseases

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Springer Science and Business Media LLC, 2009

Published in: Nature Reviews Genetics, 10 (2009) 1, Seite 43-55
Sanna, Serena; Kurilshikov, Alexander; van der Graaf, Adriaan; Fu, Jingyuan; Zhernakova, Alexandra

Challenges and future directions for studying effects of host genetics on the gut microbiome

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Springer Science and Business Media LLC, 2022

Published in: Nature Genetics, 54 (2022) 2, Seite 100-106
Wang, Daoming; Pham, Van T.; Steinert, Robert E.; Zhernakova, Alexandra; Fu, Jingyuan

Microbial vitamin production mediates dietary effects on diabetic risk

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Informa UK Limited, 2022

Published in: Gut Microbes, 14 (2022) 1
Andreu-Sánchez, Sergio; Chen, Lianmin; Wang, Daoming; Augustijn, Hannah E.; Zhernakova, Alexandra; Fu, Jingyuan

A Benchmark of Genetic Variant Calling Pipelines Using Metagenomic Short-Read Sequencing

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Frontiers Media SA, 2021

Published in: Frontiers in Genetics, 12 (2021)
Brushett, Siobhan; Sinha, Trishla; Reijneveld, Sijmen A.; de Kroon, Marlou L. A.; Zhernakova, Alexandra

The Effects of Urbanization on the Infant Gut Microbiota and Health Outcomes

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Frontiers Media SA, 2020

Published in: Frontiers in Pediatrics, 8 (2020)
Li, Cheng Mei; Zhernakova, Alexandra; Engstrand, Lars; Wijmenga, Cisca; Brusselaers, Nele

Systematic review with meta‐analysis: the risks of proton pump inhibitors during pregnancy

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Wiley, 2020

Published in: Alimentary Pharmacology & Therapeutics, 51 (2020) 4, Seite 410-420
Garmaeva, Sanzhima; Sinha, Trishla; Kurilshikov, Alexander; Fu, Jingyuan; Wijmenga, Cisca; Zhernakova, Alexandra

Studying the gut virome in the metagenomic era: challenges and perspectives

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Springer Science and Business Media LLC, 2019

Published in: BMC Biology, 17 (2019) 1
Gutierrez-Achury, Javier; Zorro, Maria Magdalena; Ricaño-Ponce, Isis; Zhernakova, Daria V.; Diogo, Dorothée; Raychaudhuri, Soumya; Franke, Lude; Trynka, Gosia; Wijmenga, Cisca; Zhernakova, Alexandra

Functional implications of disease-specific variants in loci jointly associated with coeliac disease and rheumatoid arthritis

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Oxford University Press (OUP), 2016

Published in: Human Molecular Genetics, 25 (2016) 1, Seite 180-190
Pascal Andreu, Victòria; Augustijn, Hannah E.; Chen, Lianmin; Zhernakova, Alexandra; Fu, Jingyuan; Fischbach, Michael A.; Dodd, Dylan; Medema, Marnix H.

gutSMASH predicts specialized primary metabolic pathways from the human gut microbiota

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Springer Science and Business Media LLC, 2023

Published in: Nature Biotechnology, 41 (2023) 10, Seite 1416-1423
Alexandra O. Konradi; Nadezhda E. Zvartau; Irina E. Chazova; Juliya V. Zhernakova; Aletta E. Schutte; Markus P. Schlaich

Features of antihypertensive therapy and real-world prescription of selective imidazoline receptor agonists in Russia vs other countries: STRAIGHT study data analysis

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2021

Published in: Терапевтический архив, 93 (2021) 4, Seite 440-448
van Belzen, Martine J; Mulder, Chris J J; Zhernakova, Alexandra; Pearson, Peter L; Houwen, Roderick H J; Wijmenga, Cisca

CTLA4+49 A/G and CT60 polymorphisms in Dutch coeliac disease patients

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Springer Science and Business Media LLC, 2004

Published in: European Journal of Human Genetics, 12 (2004) 9, Seite 782-785
Wu, Jiafei; Palasantzas, Victoria; Andreu-Sánchez, Sergio; Plösch, Torsten; Leonard, Sam; Li, Shuang; Bonder, Marc Jan; Westra, Harm-Jan; van Meurs, Joyce; Ghanbari, Mohsen; Franke, Lude; Zhernakova, Alexandra; Fu, Jingyuan; Hoogerland, Joanne A.; Zhernakova, Daria V.

Epigenome-wide association study on the plasma metabolome suggests self-regulation of the glycine and serine pathway through DNA methylation

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Springer Science and Business Media LLC, 2024

Published in: Clinical Epigenetics, 16 (2024) 1
Chen, Lianmin; Zhernakova, Daria V.; Kurilshikov, Alexander; Andreu-Sánchez, Sergio; Wang, Daoming; Augustijn, Hannah E.; Vich Vila, Arnau; Weersma, Rinse K.; Medema, Marnix H.; Netea, Mihai G.; Kuipers, Folkert; Wijmenga, Cisca; Zhernakova, Alexandra; Fu, Jingyuan

Influence of the microbiome, diet and genetics on inter-individual variation in the human plasma metabolome

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Springer Science and Business Media LLC, 2022

Published in: Nature Medicine, 28 (2022) 11, Seite 2333-2343

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