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Baumdicker, Franz [Author] ; Pfaffelhuber, Peter [Degree supervisor]

Bacterial population genomics - towards a population genetics view of dispensable genes = Bakterielle Populationsgenomik - eine populationsgenetische Betrachtung der genomischen Diversität

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Freiburg: Universität, 2014
Baumdicker, Franz [Author]

Bacterial population genomics - towards a population genetics view of dispensable genes ; Bakterielle Populationsgenomik - eine populationsgenetische Betrachtung der genomischen Diversität

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https://freidok.uni-freiburg.de/data/9531

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University of Freiburg: FreiDok, 2014
Baumdicker, Franz [Author]

Bacterial population genomics : towards a population genetics view of dispensable genes

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2014
Burger, Klara Elisabeth [Author]; Pfaffelhuber, Peter [Author]; Baumdicker, Franz [Author]

Neural networks for self-adjusting mutation rate estimation when the recombination rate is unknown

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University of Freiburg: FreiDok, 2022

Published in: ISSN: 1553-7358
Baumdicker, Franz [Author]; Hess, Wolfgang [Author]; Pfaffelhuber, Peter [Author]

The infinitely many genes model for the distributed genome of bacteria

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Oxford: Oxford Univ. Press, 2012

Published in: Genome biology and evolution ; 4, 4 (2012), 443-456
Baumdicker, Franz [Author]; Huebner, A.M.I. [Author]; Pfaffelhuber, Peter [Author]

The independent loss model with ordered insertions for the evolution of CRISPR spacers

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University of Freiburg: FreiDok, 2018

Published in: Theoretical population biology. - 119 (2018) , 72-82, ISSN: 1096-0325
Baumdicker, Franz; Kupczok, Anne

Tackling the Pangenome Dilemma Requires the Concerted Analysis of Multiple Population Genetic Processes

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Oxford University Press (OUP), 2023

Published in: Genome Biology and Evolution
Baumdicker, Franz; Pfaffelhuber, Peter

The infinitely many genes model with horizontal gene transfer

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Institute of Mathematical Statistics, 2014

Published in: Electronic Journal of Probability
Burger, Klara Elisabeth; Pfaffelhuber, Peter; Baumdicker, Franz

Neural networks for self-adjusting mutation rate estimation when the recombination rate is unknown

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Public Library of Science (PLoS), 2022

Published in: PLOS Computational Biology
Brüls, Thomas; Baumdicker, Franz; Smidt, Hauke

Editorial: Synthetic Microbial Ecology

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Frontiers Media SA, 2021

Published in: Frontiers in Microbiology
Ding, Wei; Baumdicker, Franz; Neher, Richard A

panX: pan-genome analysis and exploration

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Oxford University Press (OUP), 2018

Published in: Nucleic Acids Research
Baumdicker, Franz; Hess, Wolfgang R.; Pfaffelhuber, Peter

The Infinitely Many Genes Model for the Distributed Genome of Bacteria

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Oxford University Press (OUP), 2012

Published in: Genome Biology and Evolution
Wang, Yun; Baumdicker, Franz; Schweiger, Paul; Kuenzel, Sven; Staubach, Fabian

Horizontal gene transfer-mediated bacterial strain variation affects host fitness in Drosophila

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Springer Science and Business Media LLC, 2021

Published in: BMC Biology
Adrion, Jeffrey R; Cole, Christopher B; Dukler, Noah; Galloway, Jared G; Gladstein, Ariella L; Gower, Graham; Kyriazis, Christopher C; Ragsdale, Aaron P; Tsambos, Georgia; Baumdicker, Franz; Carlson, Jedidiah; Cartwright, Reed A; Durvasula, Arun; Gronau, Ilan; Kim, Bernard Y; McKenzie, Patrick; Messer, Philipp W; Noskova, Ekaterina; Ortega-Del Vecchyo, Diego; Racimo, Fernando; Struck, Travis J; Gravel, Simon; Gutenkunst, Ryan N; Lohmueller, Kirk E; [...]

A community-maintained standard library of population genetic models

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eLife Sciences Publications, Ltd, 2020

Published in: eLife
Lauterbur, M Elise; Cavassim, Maria Izabel A; Gladstein, Ariella L; Gower, Graham; Pope, Nathaniel S; Tsambos, Georgia; Adrion, Jeffrey; Belsare, Saurabh; Biddanda, Arjun; Caudill, Victoria; Cury, Jean; Echevarria, Ignacio; Haller, Benjamin C; Hasan, Ahmed R; Huang, Xin; Iasi, Leonardo Nicola Martin; Noskova, Ekaterina; Obsteter, Jana; Pavinato, Vitor Antonio Correa; Pearson, Alice; Peede, David; Perez, Manolo F; Rodrigues, Murillo F; Smith, Chris CR; [...]

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

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eLife Sciences Publications, Ltd, 2023

Published in: eLife
Lauterbur, M Elise; Cavassim, Maria Izabel A; Gladstein, Ariella L; Gower, Graham; Pope, Nathaniel S; Tsambos, Georgia; Adrion, Jeffrey; Belsare, Saurabh; Biddanda, Arjun; Caudill, Victoria; Cury, Jean; Echevarria, Ignacio; Haller, Benjamin C; Hasan, Ahmed R; Huang, Xin; Iasi, Leonardo Nicola Martin; Noskova, Ekaterina; Obsteter, Jana; Pavinato, Vitor Antonio Correa; Pearson, Alice; Peede, David; Perez, Manolo F; Rodrigues, Murillo F; Smith, Chris CR; [...]

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

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eLife Sciences Publications, Ltd, 2023

Published in: eLife

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