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  1. Betancourt, Lazaro Hiram; Sanchez, Aniel; Pla, Indira; Kuras, Magdalena; Zhou, Qimin; Andersson, Roland; Marko-Varga, Gyorgy

    Quantitative Assessment of Urea In-Solution Lys-C/Trypsin Digestions Reveals Superior Performance at Room Temperature over Traditional Proteolysis at 37 °C

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    American Chemical Society (ACS), 2018

    Published in: Journal of Proteome Research

  2. Kuras, Magdalena; Betancourt, Lazaro Hiram; Rezeli, Melinda; Rodriguez, Jimmy; Szasz, Marcell; Zhou, Qimin; Miliotis, Tasso; Andersson, Roland; Marko-Varga, Gyorgy

    Assessing Automated Sample Preparation Technologies for High-Throughput Proteomics of Frozen Well Characterized Tissues from Swedish Biobanks

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    American Chemical Society (ACS), 2018

    Published in: Journal of Proteome Research

  3. Gymnopoulos, Marco; Betancourt, Oscar; Blot, Vincent; Fujita, Ryo; Ly, Diana; Nguyen, Sophie; Snedden, Jeanette; Villicana, Jose; Wojciak, Jon; Wong, Eley; Patel, Neki; D'Hooge, Francois; Vijayakrishnan, Balakumar; Barry, Conor; Hartley, John A.; Howard, Phil W.; Newman, Roland; Coronella, Julia

    Abstract 225: TR1801-ADC, an optimized anti cMet PBD ADC with high efficacy in solid tumors of the GI tract and head & neck cancer

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    American Association for Cancer Research (AACR), 2019

    Published in: Cancer Research

  4. Shaw, Scott K.; Liu, Wenqi; Gómez Durán, César Fernando Azael; Schreiber, Cynthia L.; Betancourt Mendiola, María de Lourdes; Zhai, Canjia; Roland, Felicia M.; Padanilam, Simon J.; Smith, Bradley D.

    Non‐Covalently Pre‐Assembled High‐Performance Near‐Infrared Fluorescent Molecular Probes for Cancer Imaging

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    Wiley, 2018

    Published in: Chemistry – A European Journal

  5. Gymnopoulos, Marco; Betancourt, Oscar; Blot, Vincent; Fujita, Ryo; Galvan, Diana; Lieuw, Vincent; Nguyen, Sophie; Snedden, Jeanette; Stewart, Christine; Villicana, Jose; Wojciak, Jon; Wong, Eley; Pardo, Raul; Patel, Neki; D’Hooge, Francois; Vijayakrishnan, Balakumar; Barry, Conor; Hartley, John A.; Howard, Philip W.; Newman, Roland; Coronella, Julia

    TR1801‐ADC: a highly potent cMet antibody–drug conjugate with high activity in patient‐derived xenograft models of solid tumors

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    Wiley, 2020

    Published in: Molecular Oncology

  6. Calabrese, Claudia; Davidson, Natalie R.; Demircioğlu, Deniz; Fonseca, Nuno A.; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M.; Urban, Lara; Calabrese, Claudia; Davidson, Natalie R.; Demircioğlu, Deniz; Fonseca, Nuno A.; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M.; Urban, Lara; Greger, Liliana; Li, Siliang; [...]

    Author Correction: Genomic basis for RNA alterations in cancer

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    Springer Science and Business Media LLC, 2023

    Published in: Nature

  7. Zapatka, Marc; Borozan, Ivan; Brewer, Daniel S.; Iskar, Murat; Grundhoff, Adam; Alawi, Malik; Desai, Nikita; Sültmann, Holger; Moch, Holger; Alawi, Malik; Borozan, Ivan; Brewer, Daniel S.; Cooper, Colin S.; Desai, Nikita; Eils, Roland; Ferretti, Vincent; Grundhoff, Adam; Iskar, Murat; Kleinheinz, Kortine; Lichter, Peter; Nakagawa, Hidewaki; Ojesina, Akinyemi I.; Pedamallu, Chandra Sekhar; Schlesner, Matthias; [...]

    Author Correction: The landscape of viral associations in human cancers

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    Springer Science and Business Media LLC, 2023

    Published in: Nature Genetics

  8. Calabrese, Claudia; Davidson, Natalie R.; Demircioğlu, Deniz; Fonseca, Nuno A.; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M.; Urban, Lara; Calabrese, Claudia; Davidson, Natalie R.; Demircioğlu, Deniz; Fonseca, Nuno A.; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M.; Urban, Lara; Greger, Liliana; Li, Siliang; [...]

    Genomic basis for RNA alterations in cancer

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    Springer Science and Business Media LLC, 2020

    Published in: Nature

  9. Zapatka, Marc; Borozan, Ivan; Brewer, Daniel S.; Iskar, Murat; Grundhoff, Adam; Alawi, Malik; Desai, Nikita; Sültmann, Holger; Moch, Holger; Alawi, Malik; Borozan, Ivan; Brewer, Daniel S.; Cooper, Colin S.; Desai, Nikita; Eils, Roland; Ferretti, Vincent; Grundhoff, Adam; Iskar, Murat; Kleinheinz, Kortine; Lichter, Peter; Nakagawa, Hidewaki; Ojesina, Akinyemi I.; Pedamallu, Chandra Sekhar; Schlesner, Matthias; [...]

    The landscape of viral associations in human cancers

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    Springer Science and Business Media LLC, 2020

    Published in: Nature Genetics

  10. Gerstung, Moritz; Jolly, Clemency; Leshchiner, Ignaty; Dentro, Stefan C.; Gonzalez, Santiago; Rosebrock, Daniel; Mitchell, Thomas J.; Rubanova, Yulia; Anur, Pavana; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Wintersinger, Jeff; Kleinheinz, Kortine; Vázquez-García, Ignacio; Haase, Kerstin; Jerman, Lara; Sengupta, Subhajit; Macintyre, Geoff; Malikic, Salem; Donmez, Nilgun; Livitz, Dimitri G.; Cmero, Marek; Demeulemeester, Jonas; [...]

    Author Correction: The evolutionary history of 2,658 cancers

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    Springer Science and Business Media LLC, 2023

    Published in: Nature

  11. Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Kabbe, Rolf; Park, Peter J.; Eils, Roland; Schlesner, Matthias; Akdemir, Kadir C.; Alvarez, Eva G.; Baez-Ortega, Adrian; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Brors, Benedikt; Burns, Kathleen H.; Campbell, Peter J.; Chan, Kin; Chen, Ken; [...]

    Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer

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    Springer Science and Business Media LLC, 2022

    Published in: Nature Communications

  12. Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Awadalla, Philip; Bailey, Peter J.; Brazma, Alvis; Brooks, Angela N.; Calabrese, Claudia; Chateigner, Aurélien; Cortés-Ciriano, Isidro; Craft, Brian; Craft, David; Creighton, Chad J.; Davidson, Natalie R.; Demircioğlu, Deniz; Erkek, Serap; Fonseca, Nuno A.; Frenkel-Morgenstern, Milana; [...]

    Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

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    Springer Science and Business Media LLC, 2022

    Published in: Nature Communications

  13. Cmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Campbell, Peter J.; Cao, Shaolong; Christie, Elizabeth L.; Cun, Yupeng; Dawson, Kevin J.; Demeulemeester, Jonas; Dentro, Stefan C.; Deshwar, Amit G.; Donmez, Nilgun; Drews, Ruben M.; Eils, Roland; Fan, Yu; Fittall, Matthew W.; Garsed, Dale W.; Gerstung, Moritz; [...]

    Author Correction: Inferring structural variant cancer cell fraction

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    Springer Science and Business Media LLC, 2022

    Published in: Nature Communications

  14. Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Gerstung, Moritz; Jolly, Clemency; Haase, Kerstin; Tarabichi, Maxime; Wintersinger, Jeff; Deshwar, Amit G.; Yu, Kaixian; Gonzalez, Santiago; Rubanova, Yulia; Macintyre, Geoff; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D.; [...]

    Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig

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    Springer Science and Business Media LLC, 2022

    Published in: Nature Communications

  15. Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Kelso, Sean; Akbani, Rehan; Anur, Pavana; Bailey, Matthew H.; Buchanan, Alex; Chiotti, Kami; Covington, Kyle; Creason, Allison; Ding, Li; Ellrott, Kyle; Fan, Yu; Foltz, Steven; Getz, Gad; Hale, Walker; Haussler, David; [...]

    Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

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    Springer Science and Business Media LLC, 2020

    Published in: Nature Communications

  16. Yakneen, Sergei; Waszak, Sebastian M.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Campbell, Peter J.; Chen, Zhaohong; Cho, Sunghoon; Choi, Wan; Clapham, Peter; Davis-Dusenbery, Brandi N.; De La Vega, Francisco M.; Demeulemeester, Jonas; Dow, Michelle T.; Dursi, Lewis Jonathan; Eils, Juergen; Eils, Roland; [...]

    Butler enables rapid cloud-based analysis of thousands of human genomes

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    Springer Science and Business Media LLC, 2020

    Published in: Nature Biotechnology