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van der Velde, K Joeri; Imhann, Floris; Charbon, Bart; Pang, Chao; van Enckevort, David; Slofstra, Mariska; Barbieri, Ruggero; Alberts, Rudi; Hendriksen, Dennis; Kelpin, Fleur; de Haan, Mark; de Boer, Tommy; Haakma, Sido; Stroomberg, Connor; Scholtens, Salome; van de Geijn, Gert-Jan; Festen, Eleonora A M; Weersma, Rinse K; Swertz, Morris A

MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians

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  • Media type: E-Article
  • Title: MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians
  • Contributor: van der Velde, K Joeri; Imhann, Floris; Charbon, Bart; Pang, Chao; van Enckevort, David; Slofstra, Mariska; Barbieri, Ruggero; Alberts, Rudi; Hendriksen, Dennis; Kelpin, Fleur; de Haan, Mark; de Boer, Tommy; Haakma, Sido; Stroomberg, Connor; Scholtens, Salome; van de Geijn, Gert-Jan; Festen, Eleonora A M; Weersma, Rinse K; Swertz, Morris A
  • Published: Oxford University Press (OUP), 2019
  • Published in: Bioinformatics, 35 (2019) 6, Seite 1076-1078
  • Language: English
  • DOI: 10.1093/bioinformatics/bty742
  • ISSN: 1367-4811; 1367-4803
  • Origination:
  • Footnote:
  • Description: <jats:title>Abstract</jats:title> <jats:sec> <jats:title>Motivation</jats:title> <jats:p>The volume and complexity of biological data increases rapidly. Many clinical professionals and biomedical researchers without a bioinformatics background are generating big ’-omics’ data, but do not always have the tools to manage, process or publicly share these data.</jats:p> </jats:sec> <jats:sec> <jats:title>Results</jats:title> <jats:p>Here we present MOLGENIS Research, an open-source web-application to collect, manage, analyze, visualize and share large and complex biomedical datasets, without the need for advanced bioinformatics skills.</jats:p> </jats:sec> <jats:sec> <jats:title>Availability and implementation</jats:title> <jats:p>MOLGENIS Research is freely available (open source software). It can be installed from source code (see http://github.com/molgenis), downloaded as a precompiled WAR file (for your own server), setup inside a Docker container (see http://molgenis.github.io), or requested as a Software-as-a-Service subscription. For a public demo instance and complete installation instructions see http://molgenis.org/research.</jats:p> </jats:sec>
  • Access State: Open Access