• Media type: E-Article
  • Title: Inversion Region for Hypertension and Brachydactyly on Chromosome 12p Features Multiple Splicing and Noncoding RNA
  • Contributor: Bähring, Sylvia; Kann, Martin; Neuenfeld, Yvette; Gong, Maolian; Chitayat, David; Toka, Hakan R.; Toka, Okan; Plessis, Ghislaine; Maass, Philipp; Rauch, Anita; Aydin, Atakan; Luft, Friedrich C.
  • imprint: Ovid Technologies (Wolters Kluwer Health), 2008
  • Published in: Hypertension
  • Language: English
  • DOI: 10.1161/hypertensionaha.107.101774
  • ISSN: 0194-911X; 1524-4563
  • Origination:
  • Footnote:
  • Description: <jats:p>Autosomal-dominant hypertension and brachydactyly (Online Mendelian Inheritance in Man 112410) is a prototype-translational research project. We used interphase fluorescent in situ hybridization and discovered complex rearrangements on chromosome 12p in 5 families but elucidated a common inverted region in the linkage interval. The inversion contains no known gene. However, we found 5 expressed sequence tags in databases. We used 5′- and 3′-Rapid Amplification of cDNA Ends PCR for elongation of the transcripts in phenotype-relevant tissue (fetal aorta, fetal brain, and fetal cartilage). We detected tissue-specific multiple splicing with different exon usage of 32 exons in the gene-related structure. These different transcripts lack both open reading frames and Kozak sequences. In vitro transcription/translation experiments did not identify any peptide-related molecules. We then performed quantitative RT-PCR to test for differential expression of the various spliced transcripts in the total fibroblast RNA of affected and nonaffected Turkish family members. Skin fibroblasts of affected individuals have a significantly increased proliferation rate compared with nonaffected individuals. Ten of 12 spliced exon combinations representing all of the spliced variants do not show a significantly different RNA expression rate. However, 2 RT-PCR products are exclusively expressed in nonaffected individuals. Both reverse transcription amplicons share 1 exon. This result is surprising because of the autosomal-dominant mode of inheritance of the trait. RNA secondary prediction of this single exon results in a stable stem-loop structure known to be essential for microRNA processing. We are pursuing the possibility of microRNA expression in affected patients that leads to complete down regulation of a spliced transcript.</jats:p>
  • Access State: Open Access