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Medientyp:
Buch
Titel:
Promoter associated RNA
:
methods and protocols
Enthält:
ChIP-seq for the identification of functional elements in the human genome
/ Georgi K. Marinov
ChIP-seq for the identification of functional elements in the human genome
/ Georgi K. Marinov
Identification of candidate functional elements in the genome from ChIP-seq data
/ Georgi K. Marinov
GRO-seq, a tool for identification of transcripts regulating gene expression
/ Rui Lopes, Reuven Agami, and Gozde Korkmaz
NanoCAGE : a method for the analysis of coding and noncoding 5'-capped transcriptomes
/ Stéphane Poulain, Sachi Kato, Ophélie Arnaud, Jean-Étienne Morlighem, Makoto Suzuki, Charles Plessy, and Matthias Harbers
Deep cap analysis of gene expression (CAGE) : genome-wide identification of promoters, quantification of their activity, and transcriptional network inference
/ Alexandre Fort and Richard J. Fish
Deep-RACE : comprehensive search for novel ncRNAs associated to a specific locus
/ Chiara Pastori, Dmitry Velmeshev, and Veronica Julia Peschansky
In silico prediction of RNA secondary structure
/ Fariza Tahi, Van Du T. Tran, and Anouar Boucheham
Computational prediction of RNA-protein interactions
/ Carla M. Mann, Usha K. Muppirala, and Drena Dobbs
Isolation of nuclear RNA-associated protein complexes
/ Ranveer Singh Jayani, Amanjot Singh, and Dimple Notani
Identification of long noncoding RNAs associated to human disease susceptibility
/ Marco Magistri and Dmitry Velmeshev
Targeting promoter-associated RNAs by siRNAs
/ Sara Napoli
RNA-FISH to study regulatory RNA at the site of transcription
/ Marta Soler, Raquel Boque-Sastre, and Sonia Guil
Detection and characterization of R loop structures
/ Raquel Boque-Sastre, Marta Soler, and Sonia Guil
Induction of transcriptional gene silencing by expression of shRNA directed to c-Myc P2 promoter in hepatocellular carcinoma by tissue-specific virosomal delivery
/ Mohammad Khalid Zakaria, Debi P. Sarkar, and Parthaprasad Chattopadhyay
Targeting promoter-associated noncoding RNA in vivo
/ Gianluca Civenni
Manipulation of promoter-associated noncoding RNAs in mouse early embryos for controlling sequence-specific epigenetic status
/ Nobuhiko Hamazaki, Kinichi Nakashima, and Takuya Imamura.
Identification of candidate functional elements in the genome from ChIP-seq data
/ Georgi K. Marinov
GRO-seq, a tool for identification of transcripts regulating gene expression
/ Rui Lopes, Reuven Agami, and Gozde Korkmaz
NanoCAGE : a method for the analysis of coding and noncoding 5'-capped transcriptomes
/ Stéphane Poulain, Sachi Kato, Ophélie Arnaud, Jean-Étienne Morlighem, Makoto Suzuki, Charles Plessy, and Matthias Harbers
Deep cap analysis of gene expression (CAGE) : genome-wide identification of promoters, quantification of their activity, and transcriptional network inference
/ Alexandre Fort and Richard J. Fish
Deep-RACE : comprehensive search for novel ncRNAs associated to a specific locus
/ Chiara Pastori, Dmitry Velmeshev, and Veronica Julia Peschansky
In silico prediction of RNA secondary structure
/ Fariza Tahi, Van Du T. Tran, and Anouar Boucheham
Computational prediction of RNA-protein interactions
/ Carla M. Mann, Usha K. Muppirala, and Drena Dobbs
Isolation of nuclear RNA-associated protein complexes
/ Ranveer Singh Jayani, Amanjot Singh, and Dimple Notani
Identification of long noncoding RNAs associated to human disease susceptibility
/ Marco Magistri and Dmitry Velmeshev
Targeting promoter-associated RNAs by siRNAs
/ Sara Napoli
RNA-FISH to study regulatory RNA at the site of transcription
/ Marta Soler, Raquel Boque-Sastre, and Sonia Guil
Detection and characterization of R loop structures
/ Raquel Boque-Sastre, Marta Soler, and Sonia Guil
Induction of transcriptional gene silencing by expression of shRNA directed to c-Myc P2 promoter in hepatocellular carcinoma by tissue-specific virosomal delivery
/ Mohammad Khalid Zakaria, Debi P. Sarkar, and Parthaprasad Chattopadhyay
Targeting promoter-associated noncoding RNA in vivo
/ Gianluca Civenni
Manipulation of promoter-associated noncoding RNAs in mouse early embryos for controlling sequence-specific epigenetic status
/ Nobuhiko Hamazaki, Kinichi Nakashima, and Takuya Imamura.